CDS

Accession Number TCMCG007C56508
gbkey CDS
Protein Id XP_033137036.1
Location join(32284264..32284296,32286315..32286497,32286562..32286639,32286730..32286798,32286888..32287031,32287099..32287215,32287288..32287357,32287451..32287551,32287645..32287776,32287865..32287972,32288055..32288156,32288244..32288345)
Gene LOC103840928
GeneID 103840928
Organism Brassica rapa

Protein

Length 412aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033281145.1
Definition small RNA degrading nuclease 1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category L
Description small RNA degrading nuclease
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14570        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010586        [VIEW IN EMBL-EBI]
GO:0010587        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034661        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCTTAAACTAGCCACCGCCGAGAAACAAGTGCTTGAAGAGTTGGTGAAGCTAGTGCAGAGTCGAGGCCTGTGCGGCGAAAACGGAGGATGGAAGGAGTTTTCAGATGCTAAAGACAAGAAGAAGATTGGATCTCCAAATGACCCTTCCAAGCGTTCCCATGACGAACTTGTCGCGTTTCTGACAACCTTCAAGAAGAAACAAGACTTGCAGGTTCTGAAATGTCACGCCAATTTTCTTCTGATTGAGAAGTTAGAGCAGGATTCTCCTGGTAATGACACTCCTGAACAGAGTCTAGTTCGATTGACTGTTGAGCATCCTGCTTACTCTCTAGACTACTCATTCGAGCCACATTCTGAGGACTGGTTTGTATCCGATGTTGGAGTGAAGACGTCCAAGGTGATGGAATCAACCGAAATGGTGGCTGTTGACTGTGAGATGGTTCTTTGCGACGATGGAACTGAGGGTTTGGTCAGAGTTGGTATTGTAGACCGCGATTTAAAGGTGATCCTTGACGAATTTGTGAAACCGGACAAACCTGTGGTTGACTATAGGACTGACATTACAGGGATTACCGCTGAAGATATCGAAAAAGCCACCCTCTCCCTCGTAGACATTCAGGAAACTTTGCAGCCCTTTCTATCAAATGGTGCGATTTTGGTTGGTCACAGTTTGAACAAAGATTTGGAAGTGTTGAAGATAGATCATCCAAAAGTAATCGACACTGCACTTGTATTCAAGTATTCCAACGCAAGAAAGCCCAGAAGAGCTTCACTTAACAACCTTTGCAAGTCTATTTTGGGTTATGAAGTCAGAAAGGCAGGAGTCTCTCATGATTGTGTAAACGACGCAACAGCTGCGATGAAACTTGCACTTGCTGTTATTGAGAAAAGAGCCAACACAACAATCCCACCATCTAAAGAGATGTTGGAGGTTGAGAAAGCAAAGCTCTTTATACATAAAATCCCTCACAATGTGACATCTGAAGAGCTGGAGCAAGTTCTTTCTGGAGAGTTTACACTTGATGTTAAGCCAGCAAAAACATCGAGAGGTTGCTATTGTGCGTTTGTTGTTTTCCGTAGCTCAAAAGAAGCAGATCAAGCATTTGAAAACGTTGATGGAGACCAAGGCCAGGATTCATTTGGTTTGCCACAAAAACTGGTTGTATTTAAGCTGACTTCTGGTTCAAGAGTTAGTATATATGTCCGTAAAATGGTTGAAGATGGTTCCGCGTAG
Protein:  
MELKLATAEKQVLEELVKLVQSRGLCGENGGWKEFSDAKDKKKIGSPNDPSKRSHDELVAFLTTFKKKQDLQVLKCHANFLLIEKLEQDSPGNDTPEQSLVRLTVEHPAYSLDYSFEPHSEDWFVSDVGVKTSKVMESTEMVAVDCEMVLCDDGTEGLVRVGIVDRDLKVILDEFVKPDKPVVDYRTDITGITAEDIEKATLSLVDIQETLQPFLSNGAILVGHSLNKDLEVLKIDHPKVIDTALVFKYSNARKPRRASLNNLCKSILGYEVRKAGVSHDCVNDATAAMKLALAVIEKRANTTIPPSKEMLEVEKAKLFIHKIPHNVTSEELEQVLSGEFTLDVKPAKTSRGCYCAFVVFRSSKEADQAFENVDGDQGQDSFGLPQKLVVFKLTSGSRVSIYVRKMVEDGSA